438 lines
15 KiB
C
438 lines
15 KiB
C
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/*
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*
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* Copyright (C) 1996-2016, OFFIS e.V.
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* All rights reserved. See COPYRIGHT file for details.
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*
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* This software and supporting documentation were developed by
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*
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* OFFIS e.V.
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* R&D Division Health
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* Escherweg 2
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* D-26121 Oldenburg, Germany
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*
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*
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* Module: dcmimgle
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*
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* Author: Joerg Riesmeier
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*
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* Purpose: DicomMonochromePixelTemplate (Header)
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*
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*/
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#ifndef DIMOPXT_H
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#define DIMOPXT_H
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#include "dcmtk/config/osconfig.h"
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#include "dcmtk/ofstd/ofbmanip.h"
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#include "dcmtk/ofstd/ofcast.h"
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#include "dcmtk/dcmimgle/dipxrept.h"
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#include "dcmtk/dcmimgle/dimopx.h"
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#include "dcmtk/dcmimgle/dimoopx.h"
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/*---------------------*
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* class declaration *
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*---------------------*/
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/** Template class to handle monochrome pixel data
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*/
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template<class T>
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class DiMonoPixelTemplate
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: public DiMonoPixel,
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public DiPixelRepresentationTemplate<T>
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{
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public:
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/** constructor
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*
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** @param count number of pixels
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*/
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DiMonoPixelTemplate(const unsigned long count)
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: DiMonoPixel(count),
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Data(NULL)
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{
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MinValue[0] = 0;
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MinValue[1] = 0;
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MaxValue[0] = 0;
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MaxValue[1] = 0;
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// allocate buffer of given size
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#ifdef HAVE_STD__NOTHROW
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/* use a non-throwing new here (if available) because the allocated buffer can be huge */
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Data = new (std::nothrow) T[Count];
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#else
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/* make sure that the pointer is set to NULL in case of error */
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try
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{
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Data = new T[Count];
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}
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catch (STD_NAMESPACE bad_alloc const &)
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{
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Data = NULL;
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}
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#endif
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if (Data == NULL)
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DCMIMGLE_DEBUG("cannot allocate memory buffer for 'Data' in DiMonoPixelTemplate constructor");
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}
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/** constructor
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*
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** @param pixel pointer to input pixel data
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* @param modality pointer to object managing modality transform
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*/
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DiMonoPixelTemplate(const DiInputPixel *pixel,
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DiMonoModality *modality)
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: DiMonoPixel(pixel, modality),
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Data(NULL)
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{
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MinValue[0] = 0;
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MinValue[1] = 0;
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MaxValue[0] = 0;
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MaxValue[1] = 0;
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}
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/** constructor
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*
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** @param pixel pointer to output pixel data used for intermediate representation
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* @param modality pointer to object managing modality transform
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*/
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DiMonoPixelTemplate(DiMonoOutputPixel *pixel,
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DiMonoModality *modality)
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: DiMonoPixel(pixel, modality),
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Data(OFstatic_cast(T *, pixel->getDataPtr()))
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{
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MinValue[0] = 0;
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MinValue[1] = 0;
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MaxValue[0] = 0;
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MaxValue[1] = 0;
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}
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/** destructor
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*/
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virtual ~DiMonoPixelTemplate()
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{
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#if defined(HAVE_STD__NOTHROW) && defined(HAVE_NOTHROW_DELETE)
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/* use a non-throwing delete (if available) */
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operator delete[] (Data, std::nothrow);
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#else
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delete[] Data;
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#endif
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}
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/** get integer representation
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*
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** @return integer representation of the internally stored pixel data
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*/
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inline EP_Representation getRepresentation() const
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{
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return DiPixelRepresentationTemplate<T>::getRepresentation();
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}
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/** get pointer to internal pixel data
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*
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** @return pointer to pixel data
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*/
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inline const void *getData() const
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{
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return OFstatic_cast(const void *, Data);
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}
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/** get pointer to internal pixel data
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*
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** @return pointer to pixel data
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*/
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inline void *getDataPtr()
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{
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return OFstatic_cast(void *, Data);
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}
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/** get reference to pointer to internal pixel data.
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* The returned array points to the (single) image plane. The behaviour of
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* this method is, therefore, identical for both monochrome and color images.
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*
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** @return reference to pointer to pixel data
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*/
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inline void *getDataArrayPtr()
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{
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return OFstatic_cast(void *, &Data);
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}
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/** get minimum and maximum pixel values
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*
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** @param min reference to storage area for minimum pixel value
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* @param max reference to storage area for maximum pixel value
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*
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** @return status, true if successful, false otherwise
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*/
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inline int getMinMaxValues(double &min,
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double &max) const
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{
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min = MinValue[0];
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max = MaxValue[0];
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return 1;
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}
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/** get automatically computed min-max window
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*
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** @param idx ignore global min/max pixel values if > 0
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* @param center reference to storage area for window center value
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* @param width reference to storage area for window width value
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*
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** @return status, true if successful, false otherwise
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*/
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inline int getMinMaxWindow(const int idx,
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double ¢er,
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double &width)
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{
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int result = 0;
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if ((idx >= 0) && (idx <= 1))
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{
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if ((idx == 1) && (MinValue[1] == 0) && (MaxValue[1] == 0))
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determineMinMax(0, 0, 0x2); // determine on demand
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/* suppl. 33: "A Window Center of 2^n-1 and a Window Width of 2^n
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selects the range of input values from 0 to 2^n-1."
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*/
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center = (OFstatic_cast(double, MinValue[idx]) + OFstatic_cast(double, MaxValue[idx]) + 1) / 2; // type cast to avoid overflows !
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width = OFstatic_cast(double, MaxValue[idx]) - OFstatic_cast(double, MinValue[idx]) + 1;
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result = (width > 0); // check for valid value
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}
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return result;
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}
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/** get automatically computed Region of Interest (ROI) window
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*
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** @param left_pos x-coordinate of the top left-hand corner of the ROI (starting from 0)
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* @param top_pos y-coordinate of the top left-hand corner of the ROI (starting from 0)
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* @param width width in pixels of the rectangular ROI (minimum: 1)
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* @param height height in pixels of the rectangular ROI (minimum: 1)
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* @param columns number of columns (width) of the associated image
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* @param rows number of rows (height) of the associated image
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* @param frame index of the frame to be used for the calculation
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* @param voiCenter reference to storage area for window center value
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* @param voiWidth reference to storage area for window width value
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*
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** @return status, true if successful, false otherwise
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*/
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virtual int getRoiWindow(const unsigned long left_pos,
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const unsigned long top_pos,
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const unsigned long width,
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const unsigned long height,
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const unsigned long columns,
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const unsigned long rows,
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const unsigned long frame,
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double &voiCenter,
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double &voiWidth)
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{
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int result = 0;
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if ((Data != NULL) && (left_pos < columns) && (top_pos < rows))
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{
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T *p = Data + (columns * rows * frame) + (top_pos * columns) + left_pos;
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const unsigned long right_pos = (left_pos + width < columns) ? left_pos + width : columns;
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const unsigned long bottom = (top_pos + height < rows) ? top_pos + height : rows;
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const unsigned long skip_x = left_pos + (columns - right_pos);
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unsigned long x;
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unsigned long y;
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T value = 0;
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T min = *p; // get first pixel as initial value for min ...
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T max = min; // ... and max
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for (y = top_pos; y < bottom; ++y)
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{
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for (x = left_pos; x < right_pos; ++x)
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{
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value = *(p++);
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if (value < min)
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min = value;
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else if (value > max)
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max = value;
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}
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p += skip_x; // skip rest of current line and beginning of next
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}
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/* suppl. 33: "A Window Center of 2^n-1 and a Window Width of 2^n
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selects the range of input values from 0 to 2^n-1."
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*/
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voiCenter = (OFstatic_cast(double, min) + OFstatic_cast(double, max) + 1) / 2; // type cast to avoid overflows !
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voiWidth = OFstatic_cast(double, max) - OFstatic_cast(double, min) + 1;
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result = (width > 0); // check for valid value
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}
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return result;
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}
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/** get automatically computed histogram window
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*
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** @param thresh ignore certain percentage of pixels at lower and upper boundaries
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* @param center reference to storage area for window center value
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* @param width reference to storage area for window width value
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*
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** @return status, true if successful, false otherwise
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*/
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int getHistogramWindow(const double thresh, // could be optimized if necessary (see diinpxt.h)!
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double ¢er,
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double &width)
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{
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if ((Data != NULL) && (MinValue[0] < MaxValue[0]))
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{
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const Uint32 count = OFstatic_cast(Uint32, MaxValue[0] - MinValue[0] + 1);
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Uint32 *quant = new Uint32[count];
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if (quant != NULL)
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{
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unsigned long i;
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OFBitmanipTemplate<Uint32>::zeroMem(quant, count); // initialize array
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for (i = 0; i < Count; ++i)
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{
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if ((Data[i] >= MinValue[0]) && (Data[i] <= MaxValue[0])) // only for stability !
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++quant[OFstatic_cast(Uint32, Data[i] - MinValue[0])]; // count values
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#ifdef DEBUG
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else
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DCMIMGLE_WARN("invalid value (" << Data[i] << ") in DiMonoPixelTemplate<T>::getHistogramWindow()");
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#endif
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}
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const Uint32 threshvalue = OFstatic_cast(Uint32, thresh * OFstatic_cast(double, Count));
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Uint32 t = 0;
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i = 0;
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while ((i < count) && (t < threshvalue))
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t += quant[i++];
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const T minvalue = (i < count) ? OFstatic_cast(T, MinValue[0] + i) : 0;
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t = 0;
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i = count;
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while ((i > 0) && (t < threshvalue))
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t += quant[--i];
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const T maxvalue = (i > 0) ? OFstatic_cast(T, MinValue[0] + i) : 0;
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delete[] quant;
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if (minvalue < maxvalue)
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{
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/* suppl. 33: "A Window Center of 2^n-1 and a Window Width of 2^n
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selects the range of input values from 0 to 2^n-1."
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*/
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center = (OFstatic_cast(double, minvalue) + OFstatic_cast(double, maxvalue) + 1) / 2;
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width = OFstatic_cast(double, maxvalue) - OFstatic_cast(double, minvalue) + 1;
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return (width > 0);
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}
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}
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}
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return 0;
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}
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protected:
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/** constructor
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*
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** @param pixel pointer to intermediate pixel data (not necessarily monochrome)
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* @param modality pointer to object managing modality transform
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*/
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DiMonoPixelTemplate(const DiPixel *pixel,
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DiMonoModality *modality)
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: DiMonoPixel(pixel, modality),
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Data(NULL)
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{
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MinValue[0] = 0;
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MinValue[1] = 0;
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MaxValue[0] = 0;
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MaxValue[1] = 0;
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}
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/** constructor
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*
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** @param pixel pointer to intermediate monochrome pixel data
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* @param count number of pixels
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*/
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DiMonoPixelTemplate(const DiMonoPixel *pixel,
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const unsigned long count)
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: DiMonoPixel(pixel, count),
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Data(NULL)
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{
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MinValue[0] = 0;
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MinValue[1] = 0;
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MaxValue[0] = 0;
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MaxValue[1] = 0;
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}
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/** determine minimum and maximum pixel values
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*
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** @param minvalue starting global minimum value (0 = invalid)
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* @param maxvalue starting global maximum value (0 = invalid)
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* @param mode calculate global min/max if 0x1 bit is set (default),
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* calculate next min/max if 0x2 bit is set
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*/
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void determineMinMax(T minvalue = 0,
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T maxvalue = 0,
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const int mode = 0x1)
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{
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if (Data != NULL)
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{
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if (mode & 0x1)
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{
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if ((minvalue == 0) && (maxvalue == 0))
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{
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DCMIMGLE_DEBUG("determining global minimum and maximum pixel values for monochrome image");
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T *p = Data;
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T value = *p;
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unsigned long i;
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minvalue = value;
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maxvalue = value;
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for (i = Count; i > 1; --i) // could be optimized if necessary (see diinpxt.h) !
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{
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value = *(++p);
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if (value < minvalue)
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minvalue = value;
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else if (value > maxvalue)
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maxvalue = value;
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}
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|
}
|
||
|
|
MinValue[0] = minvalue; // global minimum
|
||
|
|
MaxValue[0] = maxvalue; // global maximum
|
||
|
|
MinValue[1] = 0; // invalidate value
|
||
|
|
MaxValue[1] = 0;
|
||
|
|
} else {
|
||
|
|
minvalue = MinValue[0];
|
||
|
|
maxvalue = MaxValue[0];
|
||
|
|
}
|
||
|
|
if (mode & 0x2)
|
||
|
|
{
|
||
|
|
DCMIMGLE_DEBUG("determining next minimum and maximum pixel values for monochrome image");
|
||
|
|
T *p = Data;
|
||
|
|
T value;
|
||
|
|
int firstmin = 1;
|
||
|
|
int firstmax = 1;
|
||
|
|
unsigned long i;
|
||
|
|
for (i = Count; i != 0; --i) // could be optimized if necessary (see diinpxt.h) !
|
||
|
|
{
|
||
|
|
value = *(p++);
|
||
|
|
if ((value > minvalue) && ((value < MinValue[1]) || firstmin))
|
||
|
|
{
|
||
|
|
MinValue[1] = value;
|
||
|
|
firstmin = 0;
|
||
|
|
}
|
||
|
|
if ((value < maxvalue) && ((value > MaxValue[1]) || firstmax))
|
||
|
|
{
|
||
|
|
MaxValue[1] = value;
|
||
|
|
firstmax = 0;
|
||
|
|
}
|
||
|
|
}
|
||
|
|
}
|
||
|
|
}
|
||
|
|
}
|
||
|
|
|
||
|
|
/// pointer to pixel data
|
||
|
|
T *Data;
|
||
|
|
|
||
|
|
|
||
|
|
private:
|
||
|
|
|
||
|
|
/// minimum pixel values (0 = global, 1 = ignoring global)
|
||
|
|
T MinValue[2];
|
||
|
|
/// maximum pixel values
|
||
|
|
T MaxValue[2];
|
||
|
|
|
||
|
|
// --- declarations to avoid compiler warnings
|
||
|
|
|
||
|
|
DiMonoPixelTemplate(const DiMonoPixelTemplate<T> &);
|
||
|
|
DiMonoPixelTemplate<T> &operator=(const DiMonoPixelTemplate<T> &);
|
||
|
|
};
|
||
|
|
|
||
|
|
|
||
|
|
#endif
|