336 lines
14 KiB
C
336 lines
14 KiB
C
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/*
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*
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* Copyright (C) 2007-2011, OFFIS e.V.
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* All rights reserved. See COPYRIGHT file for details.
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*
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* This software and supporting documentation were developed by
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*
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* OFFIS e.V.
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* R&D Division Health
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* Escherweg 2
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* D-26121 Oldenburg, Germany
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*
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*
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* Module: dcmjpls
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*
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* Author: Martin Willkomm, Marco Eichelberg
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*
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* Purpose: codec classes for JPEG-LS decoders.
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*
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*/
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#ifndef DCMJPLS_DJCODECD_H
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#define DCMJPLS_DJCODECD_H
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#include "dcmtk/config/osconfig.h"
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#include "dcmtk/dcmdata/dccodec.h" /* for class DcmCodec */
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#include "dcmtk/ofstd/ofstring.h"
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#include "dcmtk/dcmjpls/dldefine.h"
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/* forward declaration */
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class DJLSCodecParameter;
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/** abstract codec class for JPEG-LS decoders.
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* This abstract class contains most of the application logic
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* needed for a dcmdata codec object that implements a JPEG-LS decoder.
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* This class only supports decompression, it neither implements
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* encoding nor transcoding.
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*/
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class DCMTK_DCMJPLS_EXPORT DJLSDecoderBase: public DcmCodec
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{
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public:
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/// default constructor
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DJLSDecoderBase();
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/// destructor
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virtual ~DJLSDecoderBase();
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/** decompresses the given pixel sequence and
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* stores the result in the given uncompressedPixelData element.
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* @param fromRepParam current representation parameter of compressed data, may be NULL
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* @param pixSeq compressed pixel sequence
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* @param uncompressedPixelData uncompressed pixel data stored in this element
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* @param cp codec parameters for this codec
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* @param objStack stack pointing to the location of the pixel data
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* element in the current dataset.
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* @return EC_Normal if successful, an error code otherwise.
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*/
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virtual OFCondition decode(
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const DcmRepresentationParameter * fromRepParam,
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DcmPixelSequence * pixSeq,
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DcmPolymorphOBOW& uncompressedPixelData,
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const DcmCodecParameter * cp,
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const DcmStack& objStack) const;
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/** decompresses a single frame from the given pixel sequence and
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* stores the result in the given buffer.
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* @param fromParam representation parameter of current compressed
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* representation, may be NULL.
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* @param fromPixSeq compressed pixel sequence
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* @param cp codec parameters for this codec
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* @param dataset pointer to dataset in which pixel data element is contained
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* @param frameNo number of frame, starting with 0 for the first frame
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* @param startFragment index of the compressed fragment that contains
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* all or the first part of the compressed bitstream for the given frameNo.
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* Upon successful return this parameter is updated to contain the index
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* of the first compressed fragment of the next frame.
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* When unknown, zero should be passed. In this case the decompression
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* algorithm will try to determine the index by itself, which will always
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* work if frames are decompressed in increasing order from first to last,
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* but may fail if frames are decompressed in random order, multiple fragments
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* per frame and multiple frames are present in the dataset, and the offset
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* table is empty.
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* @param buffer pointer to buffer where frame is to be stored
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* @param bufSize size of buffer in bytes
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* @param decompressedColorModel upon successful return, the color model
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* of the decompressed image (which may be different from the one used
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* in the compressed images) is returned in this parameter.
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* @return EC_Normal if successful, an error code otherwise.
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*/
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virtual OFCondition decodeFrame(
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const DcmRepresentationParameter * fromParam,
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DcmPixelSequence * fromPixSeq,
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const DcmCodecParameter * cp,
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DcmItem *dataset,
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Uint32 frameNo,
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Uint32& startFragment,
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void *buffer,
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Uint32 bufSize,
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OFString& decompressedColorModel) const;
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/** compresses the given uncompressed DICOM image and stores
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* the result in the given pixSeq element.
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* @param pixelData pointer to the uncompressed image data in OW format
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* and local byte order
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* @param length of the pixel data field in bytes
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* @param toRepParam representation parameter describing the desired
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* compressed representation (e.g. JPEG quality)
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* @param pixSeq compressed pixel sequence (pointer to new DcmPixelSequence object
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* allocated on heap) returned in this parameter upon success.
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* @param cp codec parameters for this codec
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* @param objStack stack pointing to the location of the pixel data
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* element in the current dataset.
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* @return EC_Normal if successful, an error code otherwise.
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*/
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virtual OFCondition encode(
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const Uint16 * pixelData,
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const Uint32 length,
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const DcmRepresentationParameter * toRepParam,
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DcmPixelSequence * & pixSeq,
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const DcmCodecParameter *cp,
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DcmStack & objStack) const;
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/** transcodes (re-compresses) the given compressed DICOM image and stores
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* the result in the given toPixSeq element.
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* @param fromRepType current transfer syntax of the compressed image
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* @param fromRepParam current representation parameter of compressed data, may be NULL
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* @param fromPixSeq compressed pixel sequence
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* @param toRepParam representation parameter describing the desired
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* new compressed representation (e.g. JPEG quality)
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* @param toPixSeq compressed pixel sequence (pointer to new DcmPixelSequence object
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* allocated on heap) returned in this parameter upon success.
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* @param cp codec parameters for this codec
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* @param objStack stack pointing to the location of the pixel data
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* element in the current dataset.
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* @return EC_Normal if successful, an error code otherwise.
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*/
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virtual OFCondition encode(
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const E_TransferSyntax fromRepType,
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const DcmRepresentationParameter * fromRepParam,
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DcmPixelSequence * fromPixSeq,
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const DcmRepresentationParameter * toRepParam,
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DcmPixelSequence * & toPixSeq,
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const DcmCodecParameter * cp,
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DcmStack & objStack) const;
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/** checks if this codec is able to convert from the
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* given current transfer syntax to the given new
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* transfer syntax
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* @param oldRepType current transfer syntax
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* @param newRepType desired new transfer syntax
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* @return true if transformation is supported by this codec, false otherwise.
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*/
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virtual OFBool canChangeCoding(
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const E_TransferSyntax oldRepType,
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const E_TransferSyntax newRepType) const;
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/** determine color model of the decompressed image
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* @param fromParam representation parameter of current compressed
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* representation, may be NULL
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* @param fromPixSeq compressed pixel sequence
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* @param cp codec parameters for this codec
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* @param dataset pointer to dataset in which pixel data element is contained
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* @param dataset pointer to DICOM dataset in which this pixel data object
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* is located. Used to access photometric interpretation.
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* @param decompressedColorModel upon successful return, the color model
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* of the decompressed image (which may be different from the one used
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* in the compressed images) is returned in this parameter
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* @return EC_Normal if successful, an error code otherwise
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*/
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virtual OFCondition determineDecompressedColorModel(
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const DcmRepresentationParameter *fromParam,
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DcmPixelSequence *fromPixSeq,
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const DcmCodecParameter *cp,
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DcmItem *dataset,
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OFString &decompressedColorModel) const;
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private:
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// static private helper methods
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/** decompresses a single frame from the given pixel sequence and
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* stores the result in the given buffer.
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* @param fromPixSeq compressed pixel sequence
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* @param cp codec parameters for this codec
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* @param dataset pointer to dataset in which pixel data element is contained
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* @param frameNo number of frame, starting with 0 for the first frame
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* @param startFragment index of the compressed fragment that contains
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* all or the first part of the compressed bitstream for the given frameNo.
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* Upon successful return this parameter is updated to contain the index
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* of the first compressed fragment of the next frame.
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* When unknown, zero should be passed. In this case the decompression
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* algorithm will try to determine the index by itself, which will always
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* work if frames are decompressed in increasing order from first to last,
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* but may fail if frames are decompressed in random order, multiple fragments
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* per frame and multiple frames are present in the dataset, and the offset
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* table is empty.
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* @param buffer pointer to buffer where frame is to be stored
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* @param bufSize size of buffer in bytes
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* @param imageFrames number of frames in this image
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* @param imageColumns number of columns for each frame
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* @param imageRows number of rows for each frame
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* @param imageSamplesPerPixel number of samples per pixel
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* @param bytesPerSample number of bytes per sample
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* @return EC_Normal if successful, an error code otherwise.
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*/
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static OFCondition decodeFrame(
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DcmPixelSequence * fromPixSeq,
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const DJLSCodecParameter *cp,
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DcmItem *dataset,
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Uint32 frameNo,
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Uint32& startFragment,
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void *buffer,
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Uint32 bufSize,
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Sint32 imageFrames,
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Uint16 imageColumns,
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Uint16 imageRows,
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Uint16 imageSamplesPerPixel,
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Uint16 bytesPerSample);
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/** determines if a given image requires color-by-plane planar configuration
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* depending on SOP Class UID (DICOM IOD) and photometric interpretation.
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* All SOP classes defined in the 2003 edition of the DICOM standard or earlier
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* are handled correctly.
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* @param sopClassUID SOP Class UID
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* @param photometricInterpretation decompressed photometric interpretation
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* @return legal value for planar configuration
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*/
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static Uint16 determinePlanarConfiguration(
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const OFString& sopClassUID,
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const OFString& photometricInterpretation);
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/** computes the number of fragments (pixel items) that comprise the current
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* frame in the compressed pixel sequence. This method uses various approaches
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* to compute the number of fragments for a frame, including a check of the
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* offset table and checking the start of each fragment for JPEG SOI markers.
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* @param numberOfFrames total number of frames of the DICOM object
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* @param currentFrame index of current frame (0..numberOfFrames-1)
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* @param startItem index of fragment (pixel item) the frame starts with
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* @param ignoreOffsetTable flag instructing the method to ignore the offset table
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* even if present and presumably useful
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* @param pixSeq the compressed JPEG-LS pixel sequence
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* @return number of fragments for the current frame, zero upon error
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*/
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static Uint32 computeNumberOfFragments(
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Sint32 numberOfFrames,
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Uint32 currentFrame,
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Uint32 startItem,
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OFBool ignoreOffsetTable,
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DcmPixelSequence *pixSeq);
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/** check whether the given buffer contains a JPEG-LS start-of-image code
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* @param fragmentData pointer to 4 or more bytes of JPEG-LS data
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* @returns true if the first four bytes of the code stream indicate that
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* this fragment is the start of a new JPEG-LS image, i.e. starts with
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* an SOI marker followed by SOF, COM or APPn.
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*/
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static OFBool isJPEGLSStartOfImage(Uint8 *fragmentData);
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/** converts an RGB or YBR frame with 8 bits/sample from
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* color-by-pixel to color-by-plane planar configuration.
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* @param imageFrame pointer to image frame, must contain
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* at least 3*columns*rows bytes of pixel data.
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* @param columns columns
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* @param rows rows
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* @return EC_Normal if successful, an error code otherwise
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*/
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static OFCondition createPlanarConfiguration1Byte(
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Uint8 *imageFrame,
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Uint16 columns,
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Uint16 rows);
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/** converts an RGB or YBR frame with 16 bits/sample from
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* color-by-pixel to color-by-plane planar configuration.
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* @param imageFrame pointer to image frame, must contain
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* at least 3*columns*rows words of pixel data.
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* @param columns columns
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* @param rows rows
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* @return EC_Normal if successful, an error code otherwise
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*/
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static OFCondition createPlanarConfiguration1Word(
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Uint16 *imageFrame,
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Uint16 columns,
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Uint16 rows);
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/** converts an RGB or YBR frame with 8 bits/sample from
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* color-by-plane to color-by-pixel planar configuration.
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* @param imageFrame pointer to image frame, must contain
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* at least 3*columns*rows bytes of pixel data.
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* @param columns columns
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* @param rows rows
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* @return EC_Normal if successful, an error code otherwise
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*/
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static OFCondition createPlanarConfiguration0Byte(
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Uint8 *imageFrame,
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Uint16 columns,
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Uint16 rows);
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/** converts an RGB or YBR frame with 16 bits/sample from
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* color-by-plane to color-by-pixel planar configuration.
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* @param imageFrame pointer to image frame, must contain
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* at least 3*columns*rows words of pixel data.
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* @param columns columns
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* @param rows rows
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* @return EC_Normal if successful, an error code otherwise
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*/
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static OFCondition createPlanarConfiguration0Word(
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Uint16 *imageFrame,
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Uint16 columns,
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Uint16 rows);
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};
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/** codec class for JPEG-LS lossless only TS decoding
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*/
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class DCMTK_DCMJPLS_EXPORT DJLSLosslessDecoder : public DJLSDecoderBase
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{
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/** returns the transfer syntax that this particular codec
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* is able to Decode
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* @return supported transfer syntax
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*/
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virtual E_TransferSyntax supportedTransferSyntax() const;
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};
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/** codec class for JPEG-LS lossy and lossless TS decoding
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*/
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class DCMTK_DCMJPLS_EXPORT DJLSNearLosslessDecoder : public DJLSDecoderBase
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{
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/** returns the transfer syntax that this particular codec
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* is able to encode
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* @return supported transfer syntax
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*/
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virtual E_TransferSyntax supportedTransferSyntax() const;
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};
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#endif
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